“Dependent Developers”
http://markbernstein.org/May18/DependentDevelopers.html
“What changed? What went wrong, and when did it go wrong?”
I _loved_ Tinderbox when I was doing my PhD. It was the only note-taking app at the time that fit with how my brain works.
That was at least three major versions ago.
@baldur Not #Linux specific, but for the mapping of notes, there's a plugin for #TiddlyWiki: http://tiddlymap.org/
I might explore this more when I'm less busy. :D