Thu, 08 Jan 2026 13:44:29 +0000
bioinformatics, genomics, rust

📄 New paper out in Bioinformatics!
We introduce Alignoth: a lightweight CLI tool for generating portable, self-contained, interactive HTML visualizations of read alignments — no server, no GUI, works headless on clusters & workflows.

✨ Interactive pileups
📦 Single-file HTML (shareable & privacy-friendly)
🦀 Implemented in Rust

👉 https://doi.org/10.1093/bioinformatics/btaf663

🔗 Code: https://github.com/alignoth/alignoth

#bioinformatics #genomics #rust @johanneskoester