good news, we are going to be ready tomorrow to release an alpha of our new tool. Minor problem: we don't have a name... The git repository is soberly named "visualisation" #bioinformatics
@deshipu i love this idea, but I'm not sure my colleagues will like it :/
@jeanmanguy You know what Grace Hopper said. Easier to get forgiveness than permission.
@deshipu they are also my supervisors (and I don't want to sound to stupid when I submit the article to a journal...)
A bit of context:
- it's a web application
- for scientific purpose (Biology)
- about motifs found in proteins
- it visualize Position specific scoring matrix/ position weight matrix (PSSM / PWM)
- users can also manipulate the matrices
- will bu used as a GUI to interface with other scientific softwares/databases
- it will be free and open source
@jeanmanguy My suggestion: BioViz.
@TexJoachim already taken, multiple times.
@jeanmanguy Damn. ;)
@jeanmanguy
-protmot
-OOPME (Online Open Protein Motif Explorer)
-l'appàjean
@G_Devailly j'ai mes doutes, merci quand même 😃
ProMoLo: PROtein MOtif LOgos
@jeanmanguy this looks really cool! It's like builiding on top of MEME suite
@Areya that's a good idea, I could parse the MEME xml output
@jeanmanguy you should be here in Scotland at the moment: bivi.co workshop today and tomorrow on biology and visualisation...
@jandot oh yes, looks great. I didn't know :(
@jeanmanguy also check out vizbi and of course biovis (part of ismb - disclaimer: I'm general chair of that one...)
@jandot I will thanks :)
@jeanmanguy congratulations !
@jeanmanguy I always liked the names that Ian Banks gives to the spaceships in his books, like "Shoot Them Later", "Fate Amenable to Change", or "Just Read The Instructions". Maybe something like that?
https://en.wikipedia.org/wiki/List_of_spacecraft_in_the_Culture_series