Egon Willighagen @egonw@mastodon.social

Please boost

Which #universities are on #Mastodon / Fediverse?
Welche #Universitäten sind im #Fediverse?

Official:
• @unihohenheim Uni #Hohenheim, #Germany
• @unijena Uni #Jena, Germany

Own server:
• https://mastodon.utwente.nl/about @utwente #UTwente, #Netherlands
• https://metu.life/about/ @Tuan #Metu, #Turkey
• https://mastodon.mit.edu/about @maxj @dukhovni #MIT, #USA
• https://mastodon.ocf.berkeley.edu/about @staff UC #Berkeley, USA

Students’ Committee:
• @astatu #AStA #TUBerlin #Berlin, Germany.

Any missing?

in the past week I have started annotating CAS registry numbers in #wikidata with references to indicate CAS Common Chemistry https://w.wiki/3AGr This, in turn, is starting to be used to validate the CAS numbers in the English Wikidata (I can reports for other langauges too, tho) #chemistry #openscience #AmericanChemicalSociety

Fwd: "CDK, OPSIN, BridgeDb in Python 3.7 with scyjava and Bacting" https://chem-bla-ics.blogspot.com/2021/04/cdk-opsin-bridgedb-in-python-37-with.html

updated CiTO in #wikidata statistics, by Scholia: https://scholia.toolforge.org/cito/

happy to have contributed to this new work (preprint): "Open Natural Products Research: Curation and Dissemination of Biological Occurrences of Chemical Structures through #Wikidata" https://www.biorxiv.org/content/10.1101/2021.02.28.433265v1

Fwd: "Atom resolution" https://chem-bla-ics.blogspot.com/2021/02/atom-resolution.html

new blog: "Cheminformatics and Open Peer Review" https://chem-bla-ics.blogspot.com/2021/02/cheminformatics-and-open-peer-review.html

new paper: "A protocol for adding knowledge to #Wikidata: aligning resources on human coronaviruses" https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-020-00940-y (blog will follow)

Fwd: "Journal of Chemical Information and Modeling introduces new editorial guidelines around Open Science" https://chem-bla-ics.blogspot.com/2020/12/journal-of-chemical-information-and.html

Fwd: "21 Tips on how to sound #openscience" https://chem-bla-ics.blogspot.com/2020/12/21-tips-on-how-to-sound-openscience.html

Fwd: "Bacting: Code coverage, JaCoCo, codecov.io, and API coverage" https://chem-bla-ics.blogspot.com/2020/12/bacting-code-coverage-jacoco-codecovio.html

"Semantic Annotation for Tabular Data", using knowledge graphs like #DBPedia and #Wikidata.

(Khurana and Galhotra, 2020)

https://arxiv.org/pdf/2012.08594.pdf

i wonder if there is a #wikidata tool that can tell me the complexity (ideally in terms of shannon entropy or something like that) of an item over time? I like to measure the growth of information in that entry, particular linkedness.

I started a collection of wikibase-cli templates: https://github.com/maxlath/wikibase-cli-template-collection

Contributions and template requests welcome!

#wikibase #wikidata #wikibasecli

new paper: "Can an InChI for Nano Address the Need for a Simplified Representation of Complex Nanomaterials across Experimental and Nanoinformatics Studies?" https://www.mdpi.com/2079-4991/10/12/2493

Sooo this corona warn app seems to work without play service code now, thanks to @larma ! 🎉

Currently you'll have to self-build and it only works in debug mode, but it seems to work.

WiP build instructions here: https://gitlab.com/fdroid/rfp/-/issues/1387#note_455703679

Please add missing #Mastodon accounts of organisations, projects and persons to #Wikidata with the property P4033.

You can see all entries with this query
https://w.wiki/kV7
and will find interesting accounts there.
Now we have 327, let's go!

Thanks for your #retoot.

the new WikiPathways paper is now online: https://doi.org/10.1093/nar/gkaa1024 A lot of progress in the past 3 years!

[#git master/main aliases update]

alias gpom="git push origin master"

becomes

alias gpom="git push origin master 2> /dev/null || git push origin main"

so that if no `master` branch exists in the present repo, is retries with `main` instead